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October 15, 2026 ai_technology research

Deep Generative Models for Phylogenetic Inference with Complex Evolutionary Processes

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arXiv:2610.19053v1 Announce Type: new Abstract: Inference of phylogenetic trees from sequences plays a central role in understanding evolutionary relationships, with applications ranging from tracking pathogen spread to reconstructing the history of life. Conventionally, practitioners obtain posteriors over trees using likelihood-based methods like MCMC. However, likelihoods are only available for simple evolutionary models with restrictive assumptions. For realistic evolutionary models, inferen

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